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Intron Name: Anas_platyrhynchos_platyrhynchos_2_67155010_67157265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67155010 - 67157265

Intron Length:

2256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

CCTCCCGCATCT

Flanking Amino Acid:

NVTLLTSLVEGEAVHLARDF

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

34.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

85.6

0.8

0.7

80.2

Minor 5ss

32.5

-2

3.1

35.2

41.4

Minor BPS

42.3

-0.5

2.3

61.24

48.2

Associated Gene:

Gene:

TFAP2A

Ensembl Gene ID:

ENSAPLG00000003330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021456

67148122 - 67159257

11136

ENSAPLT00000003390

67147931 - 67159257

11327

ENSAPLT00000042607

67144663 - 67159257

14595

ENSAPLT00000038023

67142053 - 67159257

17205

ENSAPLT00000034050

67142053 - 67159257

17205