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Intron Name: Anas_platyrhynchos_platyrhynchos_2_67157408_67158968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67157408 - 67158968

Intron Length:

1561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTGCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCCAT

U12 Branch Point Sequence:

CTCTGCTCCATT

Flanking Amino Acid:

VTRKNMLLATKQICKEFTDL

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

74.4

35.9

Major BPS

48.8

-0

1.5

60.4

45.8

Major PPT

76.6

0.6

69.4

41.2

Minor 5ss

35.3

-1.7

3.3

48.7

41.3

Minor BPS

44.1

-0.3

2.3

63.16

47.6

Associated Gene:

Gene:

TFAP2A

Ensembl Gene ID:

ENSAPLG00000003330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034050

67142053 - 67159257

17205

ENSAPLT00000021456

67148122 - 67159257

11136

ENSAPLT00000003390

67147931 - 67159257

11327

ENSAPLT00000042607

67144663 - 67159257

14595

ENSAPLT00000038023

67142053 - 67159257

17205