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Intron Name: Anas_platyrhynchos_platyrhynchos_2_671608_687435_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

671608 - 687435

Intron Length:

15828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

TTTCCTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAG

U12 Branch Point Sequence:

CTAAGCTCAATG

Flanking Amino Acid:

GIFAIFVLAVIITLCCIFKC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

64.6

40.3

Major BPS

61.8

0.29

1.5

69.7

35.5

Major PPT

0.83

0.7

80.3

31.6

Minor 5ss

35.2

-1.7

3.3

49.2

41.2

Minor BPS

45.1

-0.5

49.06

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046589

671382 - 692721

21340

ENSAPLT00000037226

662465 - 692721

30257