Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_67367830_67372641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67367830 - 67372641

Intron Length:

4812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCAAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TTTGTTTCAAGC

Flanking Amino Acid:

EEESEMVDSQARVTSEDFPD

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

83.8

27.2

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

0.54

71.5

38.5

Minor 5ss

35.4

-1.7

2.8

44.9

43.2

Minor BPS

49.3

-0

1.9

65.33

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045541

67296801 - 67391802

95002

ENSAPLT00000003464

67237934 - 67391802

153869