Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_67862432_67863014_R

Intron Information:

Intron Rank:

150474

Intron Class:

major

Intron Phase:

Intron Coordinates:

67862432 - 67863014

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAGTTA

5'SS Class:

major

3'SS Sequence:

TTGCCTGTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TCTTCAGTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

0.9

74.2

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

68.4

0.41

1.1

64.3

41.5

Minor 5ss

34.2

-1.8

3.4

46.2

49.1

Minor BPS

0.25

2.3

76.36

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031610

67856232 - 67869484

13253