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Intron Name: Anas_platyrhynchos_platyrhynchos_2_68237135_68241023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68237135 - 68241023

Intron Length:

3889

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCAAG

5'SS Class:

major

3'SS Sequence:

TTTGTTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

TCTACTGTGATT

Flanking Amino Acid:

HDNLNEVLKRLQASNNMIHR

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

70.9

40.9

Major BPS

0.5

39.8

Major PPT

86.6

0.82

0.9

84.6

Minor 5ss

41.2

-1

2.9

53.3

43.9

Minor BPS

49.3

0.03

70.86

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028131

68234854 - 68248710

13857

ENSAPLT00000003091

68235037 - 68271440

36404