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Intron Name: Anas_platyrhynchos_platyrhynchos_2_68283358_68285288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68283358 - 68285288

Intron Length:

1931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATCCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TACATTTTAATC

Flanking Amino Acid:

CSEFGVRGYPTLKLLKPGQE

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

87.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.5

0.62

0.8

74.9

35.6

Minor 5ss

40.7

-1

2.8

50.6

39.2

Minor BPS

61.1

0.33

1.3

63.25

36.7

Associated Gene:

Gene:

TXNDC5

Ensembl Gene ID:

ENSAPLG00000003126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003198

68277874 - 68298329

20456