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Intron Name: Anas_platyrhynchos_platyrhynchos_2_68536045_68536304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68536045 - 68536304

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGGGTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

AGTTTGATAACA

Flanking Amino Acid:

DMALSVQQDNILYQTVTGLK

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

76.1

34.8

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

66.1

0.36

61.1

40.1

Minor 5ss

32.1

-2

2.7

37.9

Minor BPS

48.8

-0

2.3

67.19

38.9

Associated Gene:

Gene:

RIOK1

Ensembl Gene ID:

ENSAPLG00000004196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042087

68532301 - 68546965

14665

ENSAPLT00000004356

68534523 - 68546965

12443