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Intron Name: Anas_platyrhynchos_platyrhynchos_2_68538252_68539485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68538252 - 68539485

Intron Length:

1234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TATATTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGTTTTATATTT

Flanking Amino Acid:

SENLDDYLAKAMEIASKRTE

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

84.1

0.77

0.8

81.7

35.6

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

49.9

0.07

1.8

72.8

38.7

Associated Gene:

Gene:

RIOK1

Ensembl Gene ID:

ENSAPLG00000004196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042087

68532301 - 68546965

14665

ENSAPLT00000004356

68534523 - 68546965

12443