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Intron Name: Anas_platyrhynchos_platyrhynchos_2_68543508_68544483_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68543508 - 68544483

Intron Length:

976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATTAATCCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CTCTTATTAATC

Flanking Amino Acid:

INGCISTGKEANVYHASTSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

62.3

0.28

56.5

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

59.9

0.29

1.6

66.42

39.9

Associated Gene:

Gene:

RIOK1

Ensembl Gene ID:

ENSAPLG00000004196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042087

68532301 - 68546965

14665

ENSAPLT00000004356

68534523 - 68546965

12443