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Intron Name: Anas_platyrhynchos_platyrhynchos_2_68563748_68565124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68563748 - 68565124

Intron Length:

1377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

CTTGTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

AGGTATTGAAAA

Flanking Amino Acid:

AAVPPAAGRAGSGLLVAAQD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

60.1

42.1

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

81.6

0.71

0.8

77.3

31.5

Minor 5ss

27.2

-2.6

3.7

37.3

47.4

Minor BPS

46.6

-0.2

1.7

54.03

37.7

Associated Gene:

Gene:

SSR1

Ensembl Gene ID:

ENSAPLG00000004473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039489

68563213 - 68583161

19949

ENSAPLT00000026899

68563666 - 68583060

19395

ENSAPLT00000026695

68563213 - 68583325

20113

ENSAPLT00000004617

68563666 - 68578113

14448