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Intron Name: Anas_platyrhynchos_platyrhynchos_2_68567040_68567821_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68567040 - 68567821

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGCCTG

5'SS Class:

major

3'SS Sequence:

AACTTTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CTAACTTTAAAA

Flanking Amino Acid:

VINLNYRDVNGNMFQDAVFN

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

63.6

48.1

Major BPS

73.1

0.58

79.6

29.1

Major PPT

75.5

0.57

68.6

41.3

Minor 5ss

42.9

-0.8

3.1

55.9

41.9

Minor BPS

61.2

0.35

1.5

66.23

39.9

Associated Gene:

Gene:

SSR1

Ensembl Gene ID:

ENSAPLG00000004473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026899

68563666 - 68583060

19395

ENSAPLT00000026695

68563213 - 68583325

20113

ENSAPLT00000017578

68559895 - 68573079

13185

ENSAPLT00000004617

68563666 - 68578113

14448

ENSAPLT00000039489

68563213 - 68583161

19949