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Intron Name: Anas_platyrhynchos_platyrhynchos_2_68570540_68571074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68570540 - 68571074

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGACTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TTTCCTGTGACT

Flanking Amino Acid:

WIPQETLNQIMQSRRDKASP

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

0.22

1.2

52.4

43.3

Major PPT

70.8

0.47

66.1

39.6

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

60.5

0.41

84.49

36.3

Associated Gene:

Gene:

SSR1

Ensembl Gene ID:

ENSAPLG00000004473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039489

68563213 - 68583161

19949

ENSAPLT00000026899

68563666 - 68583060

19395

ENSAPLT00000004617

68563666 - 68578113

14448