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Intron Name: Anas_platyrhynchos_platyrhynchos_2_68570540_68573011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68570540 - 68573011

Intron Length:

2472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TAGCAATTAACA

Flanking Amino Acid:

WIPQETLNQINKASPRRLPR

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

91.4

0.93

0.6

85.5

29.2

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

52.8

0.08

1.8

64.93

40.4

Associated Gene:

Gene:

SSR1

Ensembl Gene ID:

ENSAPLG00000004473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026695

68563213 - 68583325

20113

ENSAPLT00000017578

68559895 - 68573079

13185