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Intron Name: Anas_platyrhynchos_platyrhynchos_2_68573076_68583035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68573076 - 68583035

Intron Length:

9960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAATGTT

5'SS Class:

major

3'SS Sequence:

ACTTCTCTACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TGATGCTGAATT

Flanking Amino Acid:

RAQKRSVGSDEKTHPTKT*

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

72.3

37.6

Major BPS

0.72

38.9

Major PPT

74.4

0.55

0.9

67.1

38.6

Minor 5ss

39.2

-1.2

3.5

54.1

44.3

Minor BPS

56.6

0.29

1.9

74.74

41.9

Associated Gene:

Gene:

SSR1

Ensembl Gene ID:

ENSAPLG00000004473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039489

68563213 - 68583161

19949

ENSAPLT00000026899

68563666 - 68583060

19395

ENSAPLT00000026695

68563213 - 68583325

20113