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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_68738699_68739564_F

Intron Information:

Intron Rank:
138891
Intron Class:
major
Intron Phase:
Intron Coordinates:
68738699 - 68739564
Intron Length:
866

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATTTTTT
5'SS Class:
strong_major
3'SS Sequence:
GACTCTTGTGCAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCCTAAT
U12 Branch Point Sequence:
ATCTCTGTGACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
80.8
0.73
1
82.4
30.8
Major BPS
81.9
0.79
0.9
80.1
30
Major PPT
70.8
0.47
1
65
40.9
Minor 5ss
58.1
0.27
2.3
76
39.6
Minor BPS
56.6
0.29
2
76.75
40.4

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000024775
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000033578
68738611 - 68740743
2133