Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_6905028_6910481_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6905028 - 6910481

Intron Length:

5454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAAACG

5'SS Class:

major

3'SS Sequence:

TGTTTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

TGTTTTTGAACA

Flanking Amino Acid:

LFAEEGSPVHGDVIEFHGPE

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

64.1

39.9

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

0.59

73.3

40.9

Minor 5ss

33.3

-1.9

38.4

40.5

Minor BPS

68.6

0.58

1.3

76.57

34.1

Associated Gene:

Gene:

XRCC2

Ensembl Gene ID:

ENSAPLG00000004781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004918

6904312 - 6914862

10551