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Intron Name: Anas_platyrhynchos_platyrhynchos_2_69053388_69057140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69053388 - 69057140

Intron Length:

3753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCGTGCTGACCT

Flanking Amino Acid:

YISLILAVQIAYLVQAVRAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

68.2

0.41

0.8

29.2

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

44.9

-0.3

2.1

59.86

49.3

Associated Gene:

Gene:

NRN1

Ensembl Gene ID:

ENSAPLG00000021023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037137

69053192 - 69060121

6930