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Intron Name: Anas_platyrhynchos_platyrhynchos_2_69240377_69308174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69240377 - 69308174

Intron Length:

67798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGAAA

5'SS Class:

major

3'SS Sequence:

TTGTTTATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGCTTTTGAATT

Flanking Amino Acid:

GVMEQQLVNSAGAQDKIGWA

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

67.9

38.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.3

0.82

0.8

81.8

34.6

Minor 5ss

30.6

-2.2

3.3

39.7

45.9

Minor BPS

55.9

0.26

1.4

67.13

38.2

Associated Gene:

Gene:

FARS2

Ensembl Gene ID:

ENSAPLG00000005643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027516

69140722 - 69347550

206829

ENSAPLT00000025597

69228270 - 69379043

150774

ENSAPLT00000017853

69140722 - 69379043

238322

ENSAPLT00000041869

69140314 - 69382368

242055

ENSAPLT00000005837

69144635 - 69379043

234409

ENSAPLT00000037040

69144580 - 69382368

237789