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Intron Name: Anas_platyrhynchos_platyrhynchos_2_69328930_69347452_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

69328930 - 69347452

Intron Length:

18523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

AACTTTCAATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.9

38.6

Major BPS

76.9

0.67

1.2

31.9

Major PPT

92.5

0.96

0.6

85.6

29.1

Minor 5ss

30.5

-2.2

2.5

33.4

41.8

Minor BPS

38.9

-0.7

1.9

50.85

38.1

Associated Gene:

Gene:

FARS2

Ensembl Gene ID:

ENSAPLG00000005643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027516

69140722 - 69347550

206829

ENSAPLT00000017853

69140722 - 69379043

238322

ENSAPLT00000005837

69144635 - 69379043

234409