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Intron Name: Anas_platyrhynchos_platyrhynchos_2_69506421_69507904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69506421 - 69507904

Intron Length:

1484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTTTTGTTATA

Flanking Amino Acid:

QDNTAALLPTGKLILSVDKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

82.3

31.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

87.8

0.85

0.7

84.2

30.9

Minor 5ss

58.3

0.28

2.3

72.3

Minor BPS

48.5

-0.1

2.2

69.65

37.1

Associated Gene:

Gene:

RPP40

Ensembl Gene ID:

ENSAPLG00000005691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041690

69504721 - 69515045

10325

ENSAPLT00000005897

69491957 - 69515083

23127