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Intron Name: Anas_platyrhynchos_platyrhynchos_2_69508001_69509141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69508001 - 69509141

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TCTTTTGTATGT

Flanking Amino Acid:

RYSGKKAMRYIITIDLTDSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

82.6

29.6

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

86.1

0.81

0.8

80.9

36.4

Minor 5ss

41.2

-1

2.8

Minor BPS

43.8

-0.3

2.4

66.05

45.6

Associated Gene:

Gene:

RPP40

Ensembl Gene ID:

ENSAPLG00000005691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041690

69504721 - 69515045

10325

ENSAPLT00000005897

69491957 - 69515083

23127