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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6954799_6961325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6954799 - 6961325

Intron Length:

6527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

GTGTCTTTATTT

Flanking Amino Acid:

PIDVRRPLYKNVVLSGGSTM

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

76.9

32.4

Major BPS

81.6

0.78

0.8

24.9

Major PPT

77.4

0.62

0.9

72.8

36.9

Minor 5ss

46.7

-0.3

2.8

45.1

Minor BPS

63.6

0.5

1.6

76.16

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004973

6937403 - 6962666

25264