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Intron Name: Anas_platyrhynchos_platyrhynchos_2_69877557_69878382_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
69877557 - 69878382

Intron Length:
826

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGTTTG

5'SS Class:
strong_major

3'SS Sequence:
TCTATATTGACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTATAT

U12 Branch Point Sequence:
TCTATATTGACA

Flanking Amino Acid:
ILLGCKTSSSEYKPSVAPEM

Intron Amino Acid Position:
127

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.6
0.91
0.8
80.5
35

Major BPS
66.7
0.41
1.1
63.2
42.8

Major PPT
73.1
0.52
1
68.8
41

Minor 5ss
49.9
-0
2.4
66.4
45.1

Minor BPS
56
0.18
1.7
67.81
38.4

Associated Gene:

Gene:
OTULIN

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69874224 - 69884919
10696