Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_69942261_70000237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69942261 - 70000237

Intron Length:

57977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCAGTAT

U12 Branch Point Sequence:

TGTGTTTCAACA

Flanking Amino Acid:

TNIAIDFGEQALNRGIAAVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

41.9

-0.5

1.5

33.7

42.4

Major PPT

74.6

0.55

40.3

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

56.4

0.2

1.6

67.57

39.2

Associated Gene:

Gene:

ANKH

Ensembl Gene ID:

ENSAPLG00000006461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006732

69901902 - 70000333

98432