Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_70063761_70100705_F

Intron Information:

Intron Rank:

126547

Intron Class:

major

Intron Phase:

Intron Coordinates:

70063761 - 70100705

Intron Length:

36945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTGAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

TTTTCTTTGAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

36.5

Major BPS

63.6

0.34

65.3

32.1

Major PPT

74.3

0.55

1.1

78.4

33.9

Minor 5ss

-1.2

2.9

49.8

46.2

Minor BPS

75.2

0.79

1.3

83.42

30.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022061

70062411 - 70100897

38487