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Intron Name: Anas_platyrhynchos_platyrhynchos_2_70472114_70472710_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70472114 - 70472710

Intron Length:
597

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGTGCC

5'SS Class:
strong_major

3'SS Sequence:
TTTCTCTCTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTTAT

U12 Branch Point Sequence:
TTCTCTCTGAAG

Flanking Amino Acid:
YKALGWTSQTGAVFAQQRDM

Intron Amino Acid Position:
474

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.2
0.83
1
77.2
32.8

Major BPS
76.3
0.65
1
67.3
39.3

Major PPT
78.1
0.63
1
79.7
26.2

Minor 5ss
32.6
-2
3.4
44.1
43.8

Minor BPS
49.2
-0.2
1.9
60.18
41.9

Associated Gene:

Gene:
ZNF622

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70471986 - 70478712
6727