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Intron Name: Anas_platyrhynchos_platyrhynchos_2_70481222_70482603_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

70481222 - 70482603

Intron Length:

1382

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCCAAGAAG

5'SS Class:

major

3'SS Sequence:

TGTAAACAGTTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTTTTCTAATG

Flanking Amino Acid:

QIEKELGLSQAESRDHVSCY

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

61.3

43.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

51.3

0.03

1.1

49.1

Minor 5ss

16.1

-3.9

3.4

21.5

37.5

Minor BPS

56.5

0.06

1.7

64.06

38.4

Associated Gene:

Gene:

RETREG1

Ensembl Gene ID:

ENSAPLG00000007153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035259

70481184 - 70491659

10476