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Intron Name: Anas_platyrhynchos_platyrhynchos_2_70485705_70488790_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

70485705 - 70488790

Intron Length:

3086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAACTAAG

5'SS Class:

major

3'SS Sequence:

TGAATTTTTTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTAAG

U12 Branch Point Sequence:

GTTGTGTGAATT

Flanking Amino Acid:

INQKKKERSGDVRMLCMGLL

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.31

1.2

62.5

43.8

Major BPS

61.8

0.29

1.5

69.7

35.5

Major PPT

57.9

0.18

1.8

69.5

45.7

Minor 5ss

41.9

-0.9

2.6

47.4

42.3

Minor BPS

-0.1

2.2

68.72

42.7

Associated Gene:

Gene:

RETREG1

Ensembl Gene ID:

ENSAPLG00000007153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007423

70482533 - 70492803

10271

ENSAPLT00000025444

70482533 - 70542804

60272

ENSAPLT00000017851

70482533 - 70494223

11691