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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_70569787_70570532_R

Intron Information:

Intron Rank:
28
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
70569787 - 70570532
Intron Length:
746

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GTG|GTAAGTCAA
5'SS Class:
strong_major
3'SS Sequence:
CATTTGTTTATAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TAGTAAA
U12 Branch Point Sequence:
TCTGCTTGGACA
Flanking Amino Acid:
DEQANPQNAVGTLDVGLIDS
Intron Amino Acid Position:
1331

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
87.3
0.88
0.9
75.9
35.2
Major BPS
67.4
0.43
1.1
67.9
36.3
Major PPT
78.3
0.64
0.9
72.5
37.4
Minor 5ss
33.7
-1.9
2.9
38
41
Minor BPS
55.7
0.17
1.6
66.47
40.4

Associated Gene:

Gene:
MYO10
Ensembl Gene ID:
ENSAPLG00000007175
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007486
70554498 - 70687557
133060