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Intron Name: Anas_platyrhynchos_platyrhynchos_2_70575940_70577272_R


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70575940 - 70577272

Intron Length:
1333

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGCAT

5'SS Class:
major

3'SS Sequence:
TCTTTTTTACCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCTTAAC

U12 Branch Point Sequence:
TCTTTTTTACCA

Flanking Amino Acid:
PYFHSFLYMKGGLINTWKRR

Intron Amino Acid Position:
1186

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.8
0.47
1.1
62.6
43.3

Major BPS
77.1
0.67
1
77.9
32.2

Major PPT
86.2
0.82
0.8
81.4
35

Minor 5ss
31.4
-2.1
3.6
47.4
48

Minor BPS
65.3
0.48
1.6
73.92
38.7

Associated Gene:

Gene:
MYO10

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70554498 - 70687557
133060