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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_70579566_70579974_R

Intron Information:

Intron Rank:
23
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
70579566 - 70579974
Intron Length:
409

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAATGAT
5'SS Class:
strong_major
3'SS Sequence:
ATTTTGAACGCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTTAT
U12 Branch Point Sequence:
TTTATTTTATTT
Flanking Amino Acid:
RQEAERLAQQAEEERKKQEL
Intron Amino Acid Position:
844

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
87.8
0.89
0.9
83.8
27.2
Major BPS
87.7
0.94
0.8
77.7
36.7
Major PPT
69.2
0.43
1
63.6
41.3
Minor 5ss
33.7
-1.9
3.4
48.7
47.5
Minor BPS
61.8
0.45
1.6
79.69
37

Associated Gene:

Gene:
MYO10
Ensembl Gene ID:
ENSAPLG00000007175
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007486
70554498 - 70687557
133060