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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_70581702_70585371_R

Intron Information:

Intron Rank:
20
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
70581702 - 70585371
Intron Length:
3670

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAAGTAA
5'SS Class:
strong_major
3'SS Sequence:
TTTTCTTTTGTAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AAATTAT
U12 Branch Point Sequence:
TTATCAGCAAGT
Flanking Amino Acid:
STEWQLGKNKVFLRESLEHK
Intron Amino Acid Position:
725

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
81.4
0.74
1
74.3
31.9
Major BPS
68.1
0.45
1
58.1
38.5
Major PPT
91.7
0.94
0.6
88.8
20.4
Minor 5ss
35.4
-1.7
3.3
46.2
49.1
Minor BPS
43.5
-0.4
2.5
70.41
45.9

Associated Gene:

Gene:
MYO10
Ensembl Gene ID:
ENSAPLG00000007175
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007486
70554498 - 70687557
133060