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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_70613893_70614616_R

Intron Information:

Intron Rank:
14
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
70613893 - 70614616
Intron Length:
724

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GCT|GTATGTGAT
5'SS Class:
major
3'SS Sequence:
TTCCTTCAATTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CCTTCAA
U12 Branch Point Sequence:
TTTCCTTCAATT
Flanking Amino Acid:
LLEKLNIQHANNPFYVKPRV
Intron Amino Acid Position:
531

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
67.9
0.42
1.1
67.4
37.7
Major BPS
65.8
0.39
1.1
69.2
36.3
Major PPT
70.2
0.45
0.9
71.3
33.4
Minor 5ss
43.4
-0.7
3.2
67
44.2
Minor BPS
69.6
0.69
1.5
85.73
34.4

Associated Gene:

Gene:
MYO10
Ensembl Gene ID:
ENSAPLG00000007175
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007486
70554498 - 70687557
133060