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Intron Name: Anas_platyrhynchos_platyrhynchos_2_70614710_70616304_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
70614710 - 70616304

Intron Length:
1595

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATAAAG

5'SS Class:
strong_major

3'SS Sequence:
TTCATTGTTATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
TGTGCACTAACT

Flanking Amino Acid:
NGECLDLIEKKLGLLALINE

Intron Amino Acid Position:
500

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.1
0.73
1
73.5
37.1

Major BPS
100
1.24
0.5
100
0

Major PPT
77.3
0.61
0.9
72.2
37.8

Minor 5ss
32.9
-2
2.9
40
45.6

Minor BPS
54.6
0.22
2.1
79.08
42.4

Associated Gene:

Gene:
MYO10

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70554498 - 70687557
133060