Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_70764139_70766288_R

Intron Information:

Intron Rank:

129103

Intron Class:

major

Intron Phase:

Intron Coordinates:

70764139 - 70766288

Intron Length:

2150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCATATAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

62.6

0.28

1.1

37.6

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

60.2

0.4

1.5

74.31

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043681

70763660 - 70798531

34872