Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_71686066_71694459_R

Intron Information:

Intron Rank:

133979

Intron Class:

major

Intron Phase:

Intron Coordinates:

71686066 - 71694459

Intron Length:

8394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATTAC

U12 Branch Point Sequence:

TTTTTTTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

49.7

-0

1.2

43.7

38.9

Major PPT

91.4

0.93

0.6

87.9

22.3

Minor 5ss

-1.4

47.2

42.5

Minor BPS

55.3

0.16

74.67

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026505

71681085 - 71694900

13816