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Intron Name: Anas_platyrhynchos_platyrhynchos_2_71822008_71827773_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71822008 - 71827773

Intron Length:

5766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CAATTTTTATTT

Flanking Amino Acid:

VVCENAKPGQVIQTITATDK

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.7

44.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.2

0.86

0.8

86.3

32.1

Minor 5ss

43.4

-0.7

2.9

58.6

45.9

Minor BPS

52.6

0.16

1.5

64.83

40.5

Associated Gene:

Gene:

CDH18

Ensembl Gene ID:

ENSAPLG00000005731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040098

71800686 - 72021769

221084

ENSAPLT00000024491

71800686 - 72137027

336342

ENSAPLT00000023950

71800686 - 72137027

336342

ENSAPLT00000005918

71800686 - 72137027

336342