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Intron Name: Anas_platyrhynchos_platyrhynchos_2_71827896_71846335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71827896 - 71846335

Intron Length:

18440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGAAC

5'SS Class:

strong_major

3'SS Sequence:

ATGTATTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TATTTCAGAAAG

Flanking Amino Acid:

YNITVAASEIDNPGLVSHVP

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

75.4

34.2

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

79.8

0.67

0.9

73.7

40.9

Minor 5ss

31.9

-2.1

3.2

42.1

Minor BPS

48.4

-0.2

1.9

59.94

Associated Gene:

Gene:

CDH18

Ensembl Gene ID:

ENSAPLG00000005731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005918

71800686 - 72137027

336342

ENSAPLT00000040098

71800686 - 72021769

221084

ENSAPLT00000024491

71800686 - 72137027

336342

ENSAPLT00000023950

71800686 - 72137027

336342