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Intron Name: Anas_platyrhynchos_platyrhynchos_2_71873962_71885162_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71873962 - 71885162

Intron Length:

11201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATGTACA

5'SS Class:

major

3'SS Sequence:

CCTTCCCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTGTTTGTTT

Flanking Amino Acid:

VNDNPPRFPQKHYQLYVPES

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

38.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

76.4

0.59

0.7

73.3

24.9

Minor 5ss

43.4

-0.7

2.4

48.4

41.4

Minor BPS

42.8

-0.4

3.6

78.01

39.5

Associated Gene:

Gene:

CDH18

Ensembl Gene ID:

ENSAPLG00000005731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040098

71800686 - 72021769

221084

ENSAPLT00000024491

71800686 - 72137027

336342

ENSAPLT00000005918

71800686 - 72137027

336342