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Intron Name: Anas_platyrhynchos_platyrhynchos_2_71885331_71951886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71885331 - 71951886

Intron Length:

66556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCATCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTTCCATCACA

Flanking Amino Acid:

QPYFSVDPKTGVIRTALHNM

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

86.9

30.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.65

0.8

30.3

Minor 5ss

34.8

-1.7

3.2

50.1

46.4

Minor BPS

59.9

0.31

2.1

76.13

41.2

Associated Gene:

Gene:

CDH18

Ensembl Gene ID:

ENSAPLG00000005731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005918

71800686 - 72137027

336342

ENSAPLT00000040098

71800686 - 72021769

221084

ENSAPLT00000024491

71800686 - 72137027

336342