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Intron Name: Anas_platyrhynchos_platyrhynchos_2_71952007_71961231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71952007 - 71961231

Intron Length:

9225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTGTATATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TATCAATTAACT

Flanking Amino Acid:

IVTVPEMSEMGTSVLQVTAT

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

0.72

80.3

31.7

Major PPT

0.49

65.2

39.4

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

62.2

0.46

1.8

81.78

38.4

Associated Gene:

Gene:

CDH18

Ensembl Gene ID:

ENSAPLG00000005731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005918

71800686 - 72137027

336342

ENSAPLT00000040098

71800686 - 72021769

221084

ENSAPLT00000024491

71800686 - 72137027

336342

ENSAPLT00000023950

71800686 - 72137027

336342