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Intron Name: Anas_platyrhynchos_platyrhynchos_2_72002803_72017363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

72002803 - 72017363

Intron Length:

14561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

CTTTCCCTATTA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

75.9

33.3

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

75.4

0.57

0.8

75.1

28.6

Minor 5ss

42.5

-0.8

3.1

54.4

45.2

Minor BPS

56.3

0.19

71.79

40.8

Associated Gene:

Gene:

CDH18

Ensembl Gene ID:

ENSAPLG00000005731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040098

71800686 - 72021769

221084