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Intron Name: Anas_platyrhynchos_platyrhynchos_2_72021770_72136941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

72021770 - 72136941

Intron Length:

115172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

TCTGACGTAGTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

80.2

0.68

77.3

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

43.1

-0.4

2.3

64.18

46.6

Associated Gene:

Gene:

CDH18

Ensembl Gene ID:

ENSAPLG00000005731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024491

71800686 - 72137027

336342

ENSAPLT00000023950

71800686 - 72137027

336342