Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_72379368_72379774_R

Intron Information:

Intron Rank:

133114

Intron Class:

major

Intron Phase:

Intron Coordinates:

72379368 - 72379774

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTTGT

5'SS Class:

major

3'SS Sequence:

AATTCTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TTTATGTAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.1

71.8

40.6

Major BPS

72.5

0.56

1.1

63.4

Major PPT

71.6

0.49

62.8

43.3

Minor 5ss

40.9

-1

3.1

59.4

Minor BPS

46.5

-0.1

2.4

73.28

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044595

72379288 - 72397366

18079