About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_73363029_73373330_R


Intron Information:

Intron Rank:
135307

Intron Class:
major

Intron Phase:

Intron Coordinates:
73363029 - 73373330

Intron Length:
10302

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACATATT

5'SS Class:
strong_major

3'SS Sequence:
TTTGACTTCCTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTAAA

U12 Branch Point Sequence:
GTCTCATTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.8
0.73
1
84.4
33.4

Major BPS
70.2
0.5
1
71.6
30.1

Major PPT
74.1
0.54
0.9
66.2
40.5

Minor 5ss
39.9
-1.1
3.2
59.8
44.7

Minor BPS
61.4
0.34
1.7
69.99
40.7

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

73361662 - 73373616
11955