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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_73892191_73893372_F

Intron Information:

Intron Rank:
138279
Intron Class:
major
Intron Phase:
Intron Coordinates:
73892191 - 73893372
Intron Length:
1182

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGAGCTTA
5'SS Class:
strong_major
3'SS Sequence:
AATTATGTTTCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTAAA
U12 Branch Point Sequence:
TTTATAATAATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
87.2
0.88
0.8
80.2
30.7
Major BPS
90.4
1
0.7
90.2
19.3
Major PPT
74.6
0.55
1
70.2
44.6
Minor 5ss
42
-0.9
3
55.3
48.9
Minor BPS
53.4
0.18
1.9
78.72
37.2

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000024384
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023332
73892128 - 73897568
5441