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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_73893420_73897293_F

Intron Information:

Intron Rank:
138280
Intron Class:
major
Intron Phase:
Intron Coordinates:
73893420 - 73897293
Intron Length:
3874

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAA|GTAAGCACT
5'SS Class:
strong_major
3'SS Sequence:
TTTCTCCCTGCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTATGAT
U12 Branch Point Sequence:
ATGCACTTCACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
81.1
0.73
1
78.2
36.3
Major BPS
84.6
0.86
1
74
41.2
Major PPT
87
0.83
0.7
81.7
23.1
Minor 5ss
43.7
-0.7
2.9
59.5
38.8
Minor BPS
52.6
0.16
2
73.04
43.4

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000024384
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023332
73892128 - 73897568
5441