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Intron Name: Anas_platyrhynchos_platyrhynchos_2_74139057_74140256_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

74139057 - 74140256

Intron Length:

1200

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCTGATAGT

5'SS Class:

weak_major

3'SS Sequence:

TTGAAGTGTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

CCTGTTTGAAGT

Flanking Amino Acid:

VGLLCSPGTLEAGGVHSQFQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.3

43.1

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

53.3

0.08

1.2

52.5

45.8

Minor 5ss

21.6

-3.3

3.7

30.9

37.3

Minor BPS

45.8

-0.2

1.8

58.97

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008922

74136052 - 74140455

4404