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Intron Name: Anas_platyrhynchos_platyrhynchos_2_74211257_74212663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74211257 - 74212663

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCAAACTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTCTCTTCAAAC

Flanking Amino Acid:

AVQYFLHVIKYEAQGDKAKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

78.2

0.7

79.9

32.6

Major PPT

66.4

0.37

0.9

62.9

38.2

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

61.8

0.35

1.6

71.74

39.5

Associated Gene:

Gene:

VPS4B

Ensembl Gene ID:

ENSAPLG00000006557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006878

74209704 - 74227906

18203